# RNA sequence accessions at NCBI # PI: Rebecca Gast # data version: 2018-05-17 ========================= BioProject_descrip SRA_Study BioProject BioProject_link ------------------------- Micromonas/Pyramimonas SRP090401 PRJNA342459 PRJNA342459 ========================= Experiment Library_Name Sample_Name Assay_Type LibrarySelection replicate BioSample Organism collection_date geo_loc_name isolate sample_type collected_by culture_collection depth identified_by lat lon temp ------------------------- SRX2188777 Micromonas 2 Micromonas 2 RNA-Seq cDNA Micromonas contol replicate 2 SAMN05757677 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188776 Micromonas 1 Micromonas 1 RNA-Seq cDNA Micromonas contol replicate 1 SAMN05757676 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188778 Pyramimonas 3 Pyramimonas 3 RNA-Seq cDNA Pyramimonas control replicate 3 SAMN05757686 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188779 Pyramimonas 4 Pyramimonas 4 RNA-Seq cDNA Pyramimonas control replicate 4 SAMN05757687 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188780 Pyramimonas 5 Pyramimonas 5 RNA-Seq cDNA Pyramimonas mixotrophic replicate 1 SAMN05757688 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188781 Pyramimonas 6 Pyramimonas 6 RNA-Seq cDNA Pyramimonas mixotrophic replicate 2 SAMN05757689 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188783 Pyramimonas 8 Pyramimonas 8 RNA-Seq cDNA Pyramimonas mixotrophic replicate 4 SAMN05757691 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188784 Micromonas 3 Micromonas 3 RNA-Seq cDNA Micromonas contol replicate 3 SAMN05757678 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188782 Pyramimonas 7 Pyramimonas 7 RNA-Seq cDNA Pyramimonas mixotrophic replicate 3 SAMN05757690 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188785 Micromonas 4 Micromonas 4 RNA-Seq cDNA Micromonas contol replicate 4 SAMN05757679 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188786 Micromonas 5 Micromonas 5 RNA-Seq cDNA Micromonas mixotrophic replicate 1 SAMN05757680 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188787 Micromonas 6 Micromonas 6 RNA-Seq cDNA Micromonas mixotrophic replicate 2 SAMN05757681 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188788 Micromonas 7 Micromonas 7 RNA-Seq cDNA Micromonas mixotrophic replicate 3 SAMN05757682 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188789 Micromonas 8 Micromonas 8 RNA-Seq cDNA Micromonas mixotrophic replicate 4 SAMN05757683 Micromonas sp. CCMP2099 07-Apr-1998 Canada: Baffin Bay CCMP2099 cell culture Connie Lovejoy CCMP:2099 55m nd 76.2833 -74.75 4C SRX2188790 Pyramimonas 1 Pyramimonas 1 RNA-Seq cDNA Pyramimonas control replicate 1 SAMN05757684 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C SRX2188791 Pyramimonas 2 Pyramimonas 2 RNA-Seq cDNA Pyramimonas control replicate 2 SAMN05757685 Pyramimonas tychotreta Dec-1997 Ross Sea: Antarctica RS-11 cell culture Mark Dennett nd 5m Niels Daugbjerg nd nd 4C ========================= BioProject_descrip SRA_Study BioProject BioProject_link ------------------------- Phaeocystis SRP133243 PRJNA434497 PRJNA434497 ========================= Experiment Library_Name Sample_Name Assay_Type LibrarySelection replicate BioSample Organism collection_date geo_loc_name isolate sample_type collected_by culture_collection depth identified_by lat lon temp ------------------------- SRX3732895 P_ant_dark_1 P_ant_17 RNA-Seq cDNA dark replicate 1 SAMN08562399 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732894 P_ant_0C_3 P_ant_3 RNA-Seq cDNA 0C tepmerature replicate 3 SAMN08562385 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732893 P_ant_0C_4 P_ant_4 RNA-Seq cDNA 0C tepmerature replicate 4 SAMN08562386 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732892 P_ant_surface_2 P_ant_10 RNA-Seq cDNA surface light replicate 2 SAMN08562392 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732891 P_ant_5C_1 P_ant_5 RNA-Seq cDNA 5C temperature replicate 1 SAMN08562387 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732890 P_ant_5C_3 P_ant_7 RNA-Seq cDNA 5C temperature replicate 3 SAMN08562389 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732889 P_ant_surface_1 P_ant_9 RNA-Seq cDNA surface light replicate 1 SAMN08562391 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732888 P_ant_dark_3 P_ant_19 RNA-Seq cDNA dark replicate 3 SAMN08562401 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732887 P_ant_5C_2 P_ant_6 RNA-Seq cDNA 5C temperature replicate 2 SAMN08562388 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732886 P_ant_DCM_3 P_ant_15 RNA-Seq cDNA DCM light replicate 3 SAMN08562397 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732885 P_ant_5C_4 P_ant_8 RNA-Seq cDNA 5C temperature replicate 4 SAMN08562390 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732884 P_ant_0C_1 P_ant_1 RNA-Seq cDNA 0C tepmerature replicate 1 SAMN08562383 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732883 P_ant_0C_2 P_ant_2 RNA-Seq cDNA 0C tepmerature replicate 2 SAMN08562384 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732882 P_ant_DCM_4 P_ant_16 RNA-Seq cDNA DCM light replicate 4 SAMN08562398 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732881 P_ant_dark_2 P_ant_18 RNA-Seq cDNA dark replicate 2 SAMN08562400 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732880 P_ant_surface_3 P_ant_11 RNA-Seq cDNA surface light replicate 3 SAMN08562393 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732879 P_ant_surface_4 P_ant_12 RNA-Seq cDNA surface light replicate 4 SAMN08562394 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732878 P_ant_DCM_1 P_ant_13 RNA-Seq cDNA DCM light replicate 1 SAMN08562395 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd SRX3732877 P_ant_DCM_2 P_ant_14 RNA-Seq cDNA DCM light replicate 2 SAMN08562396 Phaeocystis antarctica Dec-1997 Antarctica: Ross Sea RS-24 cell culture nd nd nd nd nd nd nd ========================= BioProject_descrip SRA_Study BioProject BioProject_link ------------------------- Kareniaceae sp. Ross Sea SRP132912 PRJNA428208 PRJNA428208 ========================= Experiment Library_Name Sample_Name Assay_Type LibrarySelection replicate BioSample Organism collection_date geo_loc_name isolate sample_type collected_by culture_collection depth identified_by lat lon temp ------------------------- SRX3701344 RSD_dark_3 RSD_19 RNA-Seq cDNA dark replicate 3 SAMN08466573 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701343 RSD_dark_4 RSD_20 RNA-Seq cDNA dark replicate 4 SAMN08466574 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701342 RSD_dark_1 RSD_17 RNA-Seq cDNA dark replicate 1 SAMN08466571 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701341 RSD_dark_2 RSD_18 RNA-Seq cDNA dark replicate 2 SAMN08466572 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701340 RSD_DCM_3 RSD_15 RNA-Seq cDNA DCM light replicate 3 SAMN08466569 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701339 RSD_DCM_4 RSD_16 RNA-Seq cDNA DCM light replicate 4 SAMN08466570 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701338 RSD_DCM_1 RSD_13 RNA-Seq cDNA DCM light replicate 1 SAMN08466567 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701337 RSD_DCM_2 RSD_14 RNA-Seq cDNA DCM light replicate 2 SAMN08466568 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701336 RSD_surface_3 RSD_11 RNA-Seq cDNA surface light replicate 3 SAMN08466565 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701335 RSD_surface_4 RSD_12 RNA-Seq cDNA surface light replicate 4 SAMN08466566 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701334 RSD_5C_3 RSD_7 RNA-Seq cDNA 5C temperature replicate 3 SAMN08466561 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701333 RSD_5C_4 RSD_8 RNA-Seq cDNA 5C temperature replicate 4 SAMN08466562 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701332 RSD_5C_1 RSD_5 RNA-Seq cDNA 5C temperature replicate 1 SAMN08466559 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701331 RSD_5C_2 RSD_6 RNA-Seq cDNA 5C temperature replicate 2 SAMN08466560 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701330 RSD_0C_3 RSD_3 RNA-Seq cDNA 0C tepmerature replicate 3 SAMN08466557 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701329 RSD_0C_4 RSD_4 RNA-Seq cDNA 0C tepmerature replicate 4 SAMN08466558 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701328 RSD_0C_1 RSD_1 RNA-Seq cDNA 0C tepmerature replicate 1 SAMN08466555 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701327 RSD_0C_2 RSD_2 RNA-Seq cDNA 0C tepmerature replicate 2 SAMN08466556 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701326 RSD_surface_1 RSD_9 RNA-Seq cDNA surface light replicate 1 SAMN08466563 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd SRX3701325 RSD_surface_2 RSD_10 RNA-Seq cDNA surface light replicate 2 SAMN08466564 Kareniaceae sp. Ross Sea Dec-1997 Antarctica: Ross Sea RS-24 mixed cell culture nd nd nd nd nd nd nd